Gonzalez-Dominguez, E., A. Alves, M. Léon, J. Armengol. 2016. Characterization of Botryosphaeriaceae species associated with diseased loquat (Eriobotrya japonica Lindl.) in Spain. Plant Pathology

http://dx.doi.org/10.1111/ppa.12556

Rodríguez-Gálvez, E., P. Guerrero, C. Barradas, P.W. Crous, A. Alves. 2016. Phylogeny and pathogenicity of Lasiodiplodia species associated with dieback of mango in Peru. Fungal Biology

http://dx.doi.org/10.1016/j.funbio.2016.06.004

Daranagama, D.A., K.M. Thambugala, A. Alves, B. Campino, T.S. Bulgakov, A.J.L. Phillips, X.Z. Liu, K.D. Hyde. 2016. Phaeobotryon negundinis sp. nov. (Botryosphaeriales) from Russia. Mycosphere

http://dx.doi.org/10.5943/mycosphere/si/1b/2

Linaldeddu, B.T., A. Alves, A.J.L. Phillips. 2016. Sardiniella urbana gen. et sp. nov., a new member of the family Botryosphaeriaceae isolated from declining Celtis australis trees in Sardinian streetscapes.

http://dx.doi.org/10.5943/mycosphere/si/1b/5

Fidalgo, C., I. Henriques, R. Riesco, M.E. Trujillo, A. Alves. 2016. Microbacterium diaminobutyricum sp. nov., a new Microbacterium species isolated from Halimione portulacoides that contains diaminobutyric acid in its cell wall and emended description of the genus Microbacterium. International Journal of Systematic and Evolutionary Microbiology

http://dx.doi.org/10.1099/ijsem.0.001379

Lopes, A., A.J.L. Phillips, A. Alves. 2016. Mating type genes in the genus Neofusicoccum: mating strategies and usefulness in species delimitation. Fungal Biology

http://dx.doi.org/10.1016/j.funbio.2016.08.011

Linaldeddu, B.T., L. Maddau, A. Franceschini, A. Alves, A.J.L. Phillips. 2016. Botryosphaeriaceae species associated with lentisk dieback in Italy and description of Diplodia insularis sp. nov. Mycosphere

http://dx.doi.org/10.5943/mycosphere/si/1b/8

Giambra, S., G. Piazza, A. Alves, V. Mondello, M. Berbegal, J. Armengol, S. Burruano. 2016. Botryosphaeriaceae species associated with diseased loquat trees in Italy and description of Diplodia rosacearum sp. nov. Mycosphere

http://dx.doi.org/10.5943/mycosphere/si/1b/9

Lopes, A., C. Barradas, A.J.L. Phillips, A. Alves. 2016. (in press) Diversity and phylogeny of Neofusicoccum species occurring in forest and urban environments in Portugal. Mycosphere.

Ferreira da Silva, M., V. Ferreira, R. Magalhães, G. Almeida, A. Alves, P. Teixeira. 2017. Detection of premature stop codons leading to truncated Internalin A among food and clinical strains of Listeria monocytogenes. Food Microbiology 63: 6–11.

http://dx.doi.org/10.1016/j.fm.2016.10.033

Bragança, H., J. Neno, J. Henriques, E. Diogo, A. Alves. 2016. First report of Diplodia quercivora causing dieback on Quercus suber and in Europe. Plant Disease 100(10): 2166.

http://dx.doi.org/10.1094/PDIS-03-16-0380-PDN

Félix, C., A.S. Duarte, R. Vitorino, A.C. Guerreiro, P. Domingues, A.C.M. Correia, A. Alves, A.C. Esteves. 2016. Temperature modulates the secretome of the phytopathogenic fungus Lasiodiplodia theobromae. Frontiers in Plant Science 7: 1096.

http://dx.doi.org/10.3389/fpls.2016.01096

Teixeira, P., M. Tacão, A. Alves, I. Henriques. 2016. Antibiotic and metal resistance in a ST395 Pseudomonas aeruginosa environmental isolate: a genomics approach. Marine Pollution Bulletin 110(1):  75–81.

http://dx.doi.org/10.1016/j.marpolbul.2016.06.086

Linaldeddu, B.T., A. Deidda, B. Scanu, A. Franceschini, A. Alves, J. Abdollahzadeh, A.J.L. Phillips. 2016. Phylogeny, morphology and pathogenicity of Botryosphaeriaceae, Diatrypaceae and Gnomoniaceae associated with branch canker and dieback of hazelnut in Sardinia (Italy). European Journal of Plant Pathology 146(2): 259–279.

http://dx.doi.org/10.1007/s10658-016-0912-z

Barradas, C., A.J.L. Phillips, A. Correia, E. Diogo, H. Bragança, A. Alves. 2016. Diversity and potential impact of Botryosphaeriaceae species associated with Eucalyptus globulus plantations in Portugal. European Journal of Plant Pathology 146(2): 245–257.

http://dx.doi.org/10.1007/s10658-016-0910-1

Henriques, I., M. Tacão, L. Leite, C. Fidalgo, S. Araújo, C. Oliveira, A. Alves. 2016. Co-selection of antibiotic and metal(loid) resistance in gram-negative epiphytic bacteria from contaminated salt marshes. Marine Pollution Bulletin 109(1): 427–434.

http://dx.doi.org/10.1016/j.marpolbul.2016.05.031

Rocha, J., M. Tacão, C. Fidalgo, A. Alves, I. Henriques. 2016. Diversity of endophytic Pseudomonas in Halimione portulacoides from metal(loid)-polluted salt marshes. Environmental Science and Pollution Research 23(13): 13255–13267.

http://dx.doi.org/10.1007/s11356-016-6483-x

Fidalgo, C., I. Henriques, J. Rocha, M. Tacão, A. Alves. 2016. Culturable endophytic bacteria from the salt marsh plant Halimione portulacoides: phylogenetic diversity, functional characterization and influence of metal(loid) contamination. Environmental Science and Pollution Research 23(10): 10200–10214.

http://dx.doi.org/10.1007/s11356-016-6208-1

Lima, F.B., C. Félix, N. Osório, A. Alves, R. Vitorino, P. Domingues, A. Correia, R.T. da Silva Ribeiro, A.C. Esteves. 2016. Secretome analysis of Trichoderma atroviride T17 as a biocontrol of Guignardia citricarpa. Biological Control 99: 38–46.

http://dx.doi.org/10.1016/j.biocontrol.2016.04.009

Andolfi, A., S. Basso, S. Giambra, G. Conigliaro, S. Lo Piccolo, A. Alves, S. Burruano. 2016. Lasiolactols A and B, produced by Lasiodiplodia mediterranea, a grapevine pathogen in Sicily. Chemistry & Biodiversity 13(4): 395–402.

http://dx.doi.org/10.1002/cbdv.201500104

Alves, C., M. Duarte, M. Ferreira, A. Alves, A. Almeida, A. Cunha. 2016. Air quality in a school with dampness and mould problems. Air Quality, Atmosphere and Health 9(2): 107–115.

http://dx.doi.org/10.1007/s11869-015-0319-6.

Cinelli, T., V. Mondello, G. Marchi, S. Burruano, A. Alves, L. Mugnai. 2016. First report of Diaporthe eres associated with cane blight of grapevine in Italy. Plant Disease 100(2): 532.

http://dx.doi.org/10.1094/PDIS-08-15-0872-PDN

Duarte A.S., A. Correia, A.C. Esteves. 2016. Bacterial collagenases - A review. Critical Reviews In Microbiology. 42, 1, 106-126.

http://informahealthcare.com/doi/abs/10.3109/1040841X.2014.904270

Alves, A., R. Riesco, A. Correia, M.E. Trujillo. 2015. Microbacterium proteolyticum sp. nov. isolated from roots of Halimione portulacoides. International Journal of Systematic and Evolutionary Microbiology 65(6): 1794–1798.

http://dx.doi.org/10.1099/ijs.0.000177

Frommlet, J., M.L. Sousa, A. Alves, S.I. Vieira, D.J. Suggett, J. Serôdio. 2015. Coral symbiotic algae calcify ex hospite in partnership with bacteria. Proceedings of the National Academy of Sciences of the United States of America 112(19):  6158–6163.

http://dx.doi.org/10.1073/pnas.1420991112

Frommlet, J., B. Guimarães, L. Sousa, J. Serôdio, A. Alves. 2015. Neptunomonas phycophila sp. nov. isolated from a culture of Symbiodinium sp. a dinoflagellate symbiont of the sea anemone Aiptasia tagetes. International Journal of Systematic and Evolutionary Microbiology 65(3): 915–919.

http://dx.doi.org/10.1099/ijs.0.000039

Rodríguez-Gálvez, E., E. Maldonado, A. Alves. 2015. Identification and pathogenicity of Lasiodiplodia theobromae causing dieback of table grapes in Peru. European Journal of Plant Pathology 141(3): 477–489.

http://dx.doi.org/10.1007/s10658-014-0557-8

Alves, A., A. Correia, J.M. Igual, M.E. Trujillo. 2014. Microbacterium endophyticum sp. nov. and Microbacterium halimionae sp. nov., endophytes isolated from the salt-marsh plant Halimione portulacoides. Systematic and Applied Microbiology 37(7): 474–479.

http://dx.doi.org/10.1016/j.syapm.2014.08.004

Alves, A., B. T. Linaldeddu, A. Deidda, B. Scanu, A.J.L. Phillips. 2014. The complex of Diplodia species associated with Fraxinus and some other woody hosts in Italy and Portugal. Fungal Diversity 67(1): 143–156.

http://dx.doi.org/10.1007/s13225-014-0282-9

Nilsson, R.H., K.D. Hyde, J. Pawlowska, M. Ryberg, L. Tedersoo, A.B. Aas, S.A. Alias, A. Alves, C.L. Anderson, A. Antonelli, A.E. Arnold, B. Bahnmann, M. Bahram, J. Bengtsson-Palme, A. Berlin, S. Branco, P. Chomnunti, A. Dissanayake, R. Drenkhan, H. Friberg, T.G. Frøslev, B. Halwachs, M. Hartmann, B. Henricot, R. Jayawardena, A. Jumpponen, H. Kauserud, S. Koskela, T. Kulik, K. Liimatainen, B. Lindahl, D. Lindner, J-K. Liu, S. Maharachchikumbura, D. Manamgoda, S. Martinsson, M.A. Neves, T. Niskanen, S. Nylinder, O.L. Pereira, D.B. Pinho, T.M. Porter, V. Queloz, T. Riit, M. Sanchez-García, F. de Sousa, E. Stefaczyk, M. Tadych, S. Takamatsu, Q. Tian, D. Udayanga, M. Unterseher, Z. Wang, S. Wikee, J. Yan, E. Larsson, K-H. Larsson, U. Kõljalg, K. Abarenkov. 2014. Improving ITS sequence data for identification of plant pathogenic fungi. Fungal Diversity 67(1): 11–19.

http://dx.doi.org/10.1007/s13225-014-0291-8

Sousa, A.C.A., J.R.S.L. Almeida, C.C. Pereira, M.R. Pastorinho, A.M.C. Pereira, A.J.A. Nogueira, L. Taborda-Barata, J.P. Teixeira, A.C.M. Correia, A. Alves. 2014. Characterization of fungal communities in house dust samples collected from Central Portugal – a preliminary survey. Journal of Toxicology and Environmental Health, Part A, Current Issues.  77: 972–982.

http://dx.doi.org/10.1080/15287394.2014.911137

Campos, D., A. Alves, M.F.L. Lemos, A. Correia, A.M.V.M. Soares, J.L.T. Pestana. 2014. Effects of cadmium and resource quality on freshwater detritus processing chains: a microcosm approach with two insect species. Ecotoxicology 23(5): 830–839.

http://dx.doi.org/10.1007/s10646-014-1223-9

Fernandes, I., A. Alves, A. Correia, B. Devreese, A.C. Esteves. 2014. Secretome analysis identifies potential virulence factors of Diplodia corticola, a fungal pathogen involved in cork oak (Quercus suber) decline. Fungal Biology 118: 516–523.

http://dx.doi.org/10.1016/j.funbio.2014.04.006

Esteves, A.C., M. Saraiva, A. Correia, A. Alves. 2014. Botryosphaeriales fungi produce extracellular enzymes with biotechnological potential. Canadian Journal of Microbiology 60(5): 332–342.

http://dx.doi.org/10.1139/cjm-2014-0134

Seabra, M.P., L. Grave, C. Oliveira, A. Alves, A. Correia, J.A. Labrincha. 2014. Porcelain stoneware tiles with antimicrobial action. Ceramics International 40: 6063–6070.

http://dx.doi.org/10.1016/j.ceramint.2013.11.056

Araújo, S., I.S. Henriques, S. Leandro, A. Alves, A. Pereira, A. Correia. 2014. Gulls identified as major source of fecal pollution in coastal waters: A microbial source tracking study. Science of the Total Environment 470–471: 84–91.

http://dx.doi.org/10.1016/j.scitotenv.2013.09.075

Phillips, A.J.L., A. Alves, J. Abdollahzadeh, B. Slippers, M.J. Wingfield, J.Z. Groenewald, P.W. Crous. 2013. The Botryosphaeriaceae: Genera and species known from culture. Studies in Mycology 76: 51–167.

http://dx.doi.org/10.3114/sim0021

Linaldeddu, B.T., A. Franceschini, A. Alves, A.J.L. Phillips. 2013. Diplodia quercivora sp. nov.: a new species of Diplodia on declining Quercus canariensis trees in Tunisia. Mycologia 105: 1266–1274.

http://dx.doi.org/10.3852/12-370

Pereira, A., A. Santos, M. Tacão, A. Alves, I. Henriques, A. Correia. 2013. Genetic diversity and antimicrobial resistance of Escherichia coli from Tagus estuary (Portugal). Science of the Total Environment 461: 65–71.

http://dx.doi.org/10.1016/j.scitotenv.2013.04.067

Barradas, C., A. Correia, A. Alves. 2013. First report of Neofusicoccum australe and N. luteum associated with canker and dieback of Quercus robur in Portugal. Plant Disease 97(4): 560.

http://dx.doi.org/10.1094/PDIS-10-12-0955-PDN

Alves, A., C. Barradas, A.J.L. Phillips, A. Correia. 2013. Diversity of Botryosphaeriaceae species associated with conifers in Portugal. European Journal of Plant Pathology 135: 791–804.

http://dx.doi.org/10.1007/s10658-012-0122-2

Phillips, A.J.L., J. Lopes, J. Abdollahzadeh, S. Bobev, A. Alves. 2012. Resolving the complex of Diplodia species on apple and other Rosaceae hosts. Persoonia 29: 29–38.

http://dx.doi.org/10.3767/003158512X658899

Loureiro, C., B.B. Castro, M.T. Claro, A. Alves, M.A. Pedrosa, F. Gonçalves. 2012. Genetic variability in the tolerance of natural populations of Simocephalus vetulus (Müller, 1776) to lethal levels of sodium chloride. Annales de Limnologie – International Journal of Limnology 48: 95–103.

http://dx.doi.org/10.1051/limn/2012002

Oliveira, H., A. Sousa, A. Alves, A.J.A Nogueira, C. Santos. 2012. Inoculation with Ophiostoma novo-ulmi subsp. americana affects photosynthesis, nutrition and oxidative stress in in vitro Ulmus minor plants. Environmental and Experimental Botany 77: 146–155.

http://dx.doi.org/10.1016/j.envexpbot.2011.11.008

Galhano, V.M.F., D.R. de Figueiredo, A. Alves, A. Correia, M.J. Pereira, J.G. Laranjo, F. Peixoto. 2011. Morphological, biochemical and molecular characterization of Anabaena, Aphanizomenon and Nostoc strains (Cyanobacteria, Nostocales) isolated from Portuguese freshwater habitats. Hydrobiologia 663: 187–203.

http://dx.doi.org/10.1007/s10750-010-0572-5

Duarte, S., C. Pascoal, A. Alves, A. Correia, F. Cássio. 2010. Assessing the dynamic of microbial communities during leaf decomposition in a low-order stream by microscopic and molecular techniques. Microbiological Research 165: 351–362.

http://dx.doi.org/10.1016/j.micres.2009.06.002

de Figueiredo, D.R., A. Alves, M. Pereira, A. Correia. 2010. Molecular characterization of bloom-forming Aphanizomenon strains isolated from Vela Lake (Western Central Portugal). Journal of Plankton Research 32: 239–252.

http://dx.doi.org/10.1093/plankt/fbp111

Phillips, A.J.L., A. Alves. 2009. Taxonomy, phylogeny, and epitypification of Melanops tulasnei, the type species of Melanops. Fungal Diversity 38: 155–166.

Sergeeva, V., A. Alves, A.J.L. Phillips. 2009. Neofusicoccum luteum associated with leaf necrosis and fruit rot of olives in New South Wales, Australia. Phytopathologia Mediterranea 48(2): 294–298.

Henriques, I.S., F. Fonseca, A. Alves, M.J. Saavedra, A. Correia. 2008. Tetracycline-resistance genes in Gram-negative isolates from estuarine waters. Letters in Applied Microbiology 47: 526–533.

http://dx.doi.org/10.1111/j.1472-765X.2008.02452.x

Lazzizera, C., S. Frisullo, A. Alves, A.J.L. Phillips. 2008. Morphology, phylogeny and pathogenicity of Botryosphaeria and Neofusicoccum species associated with drupe rot of olives in Southern Italy. Plant Pathology 57(5): 948–956.

http://dx.doi.org/10.1111/j.1365-3059.2008.01842.x

Lazzizera, C., S. Frisullo, A. Alves, J. Lopes, A.J.L. Phillips. 2008. Phylogeny and morphology of Diplodia species on olives in Southern Italy and description of Diplodia olivarum sp. nov. Fungal Diversity 31: 63–71.

www.fungaldiversity.org/fdp/sfdp/31-5.pdf

Phillips, A.J.L., A. Alves, S. Pennycook, P. Johnston, A. Ramaley, A. Akulov, P.W. Crous. 2008. Resolving the phylogenetic and taxonomic status of dark-spored teleomorph genera in the Botryosphaeriaceae. Persoonia 21: 29–55.

http://dx.doi.org/10.3767/003158508X340742

Alves, A., P.W. Crous, A. Correia, A.J.L. Phillips. 2008. Morphological and molecular data reveal cryptic speciation in Lasiodiplodia theobromae. Fungal Diversity 28: 1–13.

www.fungaldiversity.org/fdp/sfdp/28-1.pdf

Duarte, S., C. Pascoal, A. Alves, A. Correia, F. Cássio. 2008. Copper and zinc mixtures induce shifts in microbial communities and reduce leaf litter decomposition in streams. Freshwater Biology 53(1): 91–101.

 http://dx.doi.org/10.1111/j.1365-2427.2007.01869.x

Phillips, A.J.L., P.W. Crous, A. Alves. 2007. Diplodia seriata, the anamorph of “Botryosphaeria” obtusa. Fungal Diversity 25: 141–155.

http://www.fungaldiversity.org/fdp/sfdp/25-9.pdf

17. Alves, A., A.J.L. Phillips, I. Henriques, A. Correia. 2007. Rapid differentiation of species of Botryosphaeriaceae by PCR fingerprinting. Research in Microbiology 158: 112–121.

http://dx.doi.org/10.1016/j.resmic.2006.10.003

Henriques, I.S., F. Fonseca, A. Alves, M.J. Saavedra, A. Correia. 2006. Occurrence and diversity of integrons and β-lactamase genes among ampicillin-resistant isolates from estuarine waters. Research in Microbiology 157: 938–947.

http://dx.doi.org/10.1016/j.resmic.2006.09.003

Alves, A., A. Correia, A.J.L. Phillips. 2006. Multi-gene genealogies and morphological data support Diplodia cupressi sp nov., previously recognized as D. pinea f. sp. cupressi, as a distinct species. Fungal Diversity 23: 1–15.

http://www.fungaldiversity.org/fdp/sfdp/23-1.pdf

Crous, P.W., B. Slippers, M.J. Wingfield, J. Reeder, W.F.O. Marasas, A.J.L. Phillips, A. Alves, T. Burgess, P. Barber, J.Z. Groenewald. 2006. Phylogenetic lineages in the Botryosphaeriaceae. Studies in Mycology 55: 235–253.

http://dx.doi.org/10.3114/sim.55.1.235

13. Henriques, I.S., A. Alves, M. Tacão, A. Almeida, A. Cunha, A. Correia. 2006. Seasonal and spatial variability of free-living bacterial community composition along an estuarine gradient (Ria de Aveiro, Portugal). Estuarine Coastal and Shelf Science 68: 139–148.

http://dx.doi.org/10.1016/j.ecss.2006.01.015

Henriques, I., A. Moura, A. Alves, M. J. Saavedra, A. Correia. 2006. Analysing diversity among beta-lactamase encoding genes in aquatic environments. FEMS Microbiology Ecology 56: 418–429.

http://dx.doi.org/10.1111/j.1574-6941.2006.00073.x

Phillips, A.J.L., P.V. Oudemans, A. Correia, A. Alves. 2006. Characterisation and epitypification of Botryosphaeria corticis, the cause of blueberry cane canker. Fungal Diversity 21: 141–155.

http://www.fungaldiversity.org/fdp/sfdp/21-10.pdf

Tacão, M., A. Alves, M.J. Saavedra, A. Correia. 2005. BOX-PCR is an adequate tool for typing Aeromonas spp. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 88: 173–179.

http://dx.doi.org/10.1007/s10482-005-3450-9

Phillips, A.J.L., A. Alves, A. Correia, J. Luque. 2005. Two new species of Botryosphaeria with brown, 1-septate ascospores and Dothiorella anamorphs. Mycologia 97: 513–529.

http://dx.doi.org/10.3852/mycologia.97.2.513

Phillips, A.J.L., I.C. Rumbos, A. Alves, and A. Correia. 2005. Morphology and phylogeny of Botryosphaeria dothidea causing fruit rot of olives. Mycopathologia 159: 433–439.

http://dx.doi.org/10.1007/s11046-005-0256-2

Tacão, M., A. Moura, A. Alves, I. Henriques, M. J. Saavedra, A. Correia. 2005. Evaluation of 16S rDNA- and gyrB-DGGE for typing members of the genus Aeromonas. FEMS Microbiology Letters 246: 11–18.

http://dx.doi.org/10.1016/j.femsle.2005.03.033

Alves, A., A.J.L. Phillips, I. Henriques, A. Correia. 2005. Evaluation of amplified ribosomal DNA restriction analysis as a method for the identification of Botryosphaeria species. FEMS Microbiology Letters 245: 221–229.

http://dx.doi.org/10.1016/j.femsle.2005.03.005

Alves, A., I. Henriques, S. Fragoeiro, C. Santos, A.J.L. Phillips, A. Correia. 2004. Applicability of rep-PCR genomic fingerprinting to molecular discrimination of members of the genera Phaeoacremonium and Phaeomoniella. Plant Pathology 53: 629–634.

http://dx.doi.org/10.1111/j.1365-3059.2004.01069.x

Alves, A., A. Correia, J. Luque, A. Phillips. 2004. Botryosphaeria corticola, sp nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph, Diplodia mutila. Mycologia 96: 598–613.

http://dx.doi.org/10.2307/3762177

Henriques, I., A. Moura, A. Alves, M.J. Saavedra, A. Correia. 2004. Molecular characterization of a carbapenem-hydrolyzing class A β-lactamase, SFC-1, from Serratia fonticola UTAD54. Antimicrobial Agents and Chemotherapy 48: 2321–2324.

http://dx.doi.org/10.1128/AAC.48.6.2321-2324.2004

Saavedra, M.J., L. Peixe, J.C. Sousa, I. Henriques, A. Alves, A. Correia. 2003. Sfh-1, a subclass B2 metallo-β-lactamase from a Serratia fonticola environmental isolate. Antimicrobial Agents and Chemotherapy 47: 2330–2333.

http://dx.doi.org/10.1128/AAC.47.7.2330-2333.2003

Alves, A., O. Santos, I. Henriques, A. Correia. 2002. Evaluation of methods for molecular typing and identification of members of the genus Brevibacterium and other related species. FEMS Microbiology Letters 213: 205–211.

http://dx.doi.org/10.1111/j.1574-6968.2002.tb11307.x

“ALIEN – An integrated approach to unravel Lasiodiplodia–grapevine Interactions”

Execution period: 2016-2019

Funding entity: FCT (ref. PTDC/AGR-PRO/2183/2014)

Project leader: Artur Alves (Departamento de Biologia e CESAM, Universidade de Aveiro)

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“URGENTpine – UnRaveling host–pathoGEn iNteracTions in pine pitch canker disease”

Execution period: 2016-2019

Funding entity: FCT (ref. PTDC/AGR-FOR/2768/2014)

Project leader:  Glória Pinto (Departamento de Biologia e CESAM, Universidade de Aveiro)

“Symbiolite – A novel microbial–algal calcification process driven by coral symbiotic algae: Structure, function, ecological role and evolutionary significance”

Execution period: 2016-2019

Funding entity: FCT (ref. PTDC/MAR-EST/2768/2014)

Project leader: João Serôdio (Departamento de Biologia e CESAM, Universidade de Aveiro)

“PANDORA – Potential impact of climate changes on Botryosphaeriaceae-related diseases of Eucalyptus spp. in Portugal”

Execution period: 2013-2015

Funding entity: FCT (ref. PTDC/AGR-FOR/3807/2012)

Project leader: Artur Alves (Departamento de Biologia e CESAM, Universidade de Aveiro)

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"PhytoMarsh – The phytosphere of salt-marsh plants: an underexplored microbial hot-spot"

Execution period: 2012-2015

Funding entity:  FCT (ref. PTDC/AAC-AMB/118873/2010)

Project leader: Artur Alves (Departamento de Biologia e CESAM, Universidade de Aveiro)

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"A microbiota de duas espécies de bivalves de importância económica, Cerastoderma edule (berbigão) e Ruditapes philippinarum (amêijoa japónica): modo de associação e transmissão em situações de simpatria"

Execution period: 2012-2015

Funding entity: AdI (QREN)

Project leader: Artur Alves (Departamento de Biologia e CESAM, Universidade de Aveiro)

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 “LUNA – Low-flying Unmanned Aereal forest monitoring system”

Execution period: 2014-2015

Funding entity: FCT (ref. PTDC/AGR-FOR/2768/2014)

Project leader:  Ricardo Almendra (GeoAtributo – Consultadoria e Informação para o Planeamento e Ordenamento do Território, Lda) e J. Jacob Keizer (Departamento de Ambiente e CESAM, Universidade de Aveiro)

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 “MicroNema – Spatial and temporal analysis of microbial community in Pine Wilt Disease”

Execution period: 2013-2015

Funding entity: FCT (ref. PTDC/BIA-MIC/3768/2012)

Project leader:  António Correia (Departamento de Biologia e CESAM, Universidade de Aveiro)

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 “Inventário, dinâmica e impacto dos parasitas trématodes e bactérias em bivalves de elevada importância económica em Portugal”

Execution period: 2012-2014

Funding entity: CRUP- Acção Integrada Luso-Francesa (ref.ª: TC–07_12)

Project leader:  Rosa Freitas (Departamento de Biologia e CESAM, Universidade de Aveiro)

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“PROMETHEUS – PROteoME of Diplodia corticola, the cork oak paTHogEn fungus”

Execution period: 2011-2014

Funding entity: FCT (ref. PTDC/AGR-CFL/113831/2009)

Project leader:  Ana Cristina Esteves (Departamento de Biologia e CESAM, Universidade de Aveiro)

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“SEAGULL – Identification of nonpoint sources of faecal pollution in a natural environment: contributing data for risk assessment”

Execution period: 2010-2013

Funding entity: FCT (ref. PTDC/AAC-AMB/109155/2008)

Project leader:  Anabela Pereira (Departamento de Biologia e CESAM, Universidade de Aveiro)

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“Listeria monocytogenes in foods: contributing data for risk assessment”

Execution period: 2007-2010

Funding entity: FCT (ref. PTDC/AGR-ALI/64662/2006)

Project leader:  Paula Teixeira (Universidade Católica Portuguesa, Escola Superior de Biotecnologia)

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 “The plant pathogenic genus Phomopsis and its Diaporthe teleomorphs: development and application of morphological, biological and phylogenetic species concepts”

Execution period: 2007-2010

Funding entity: FCT (ref. PTDC/AGR-AAM/67064/2006)

Project leader:  Alan J.L. Phillips (Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa)

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 “The genus Botryosphaeria in Portugal: species with Diplodia and Dothiorella anamorphs and pathogenic on woody hosts”

Execution period: 2005-2009

Funding entity: FCT (ref. POCTI/AGR/56140/2004)

Project leader:  Alan J.L. Phillips (Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa)

“Characterization and genetic diversity of Botryosphaeria stevensii and other species of Botryosphaeria associated with cork oak (Quercus suber)”

Execution period: 2003-2006

Funding entity: FCT (ref. POCTI/AGR/44348/2002)

Project leader:  Alan J.L. Phillips (Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa)